C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuromedin B receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258042 NMBR-001 ENSG00000135577 9606 - 6:142075608-142088799 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyOvaryTestisENST00000258042
Transcript ID Brain Heart Kidney Ovary Testis
ENST00000258042 0.259±0.09 0.018±0.01 0.065±0.00 0.102±0.02 0.352±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030Q CIL_00030Q_0002 CGP 6:139371807-142088799
CIL_00030N CIL_00030N_0002 CGP 6:142058330-142135151

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004946 IEA bombesin receptor activity
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 TAS:IEA G-protein coupled receptor signaling pathway
GO:0007200 TAS phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0031989 IEA bombesin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020015 Nmbr-001 protein_coding Mus_musculus 0 1301
ENSMUST00000186382 Nmbr-007 nonsense_mediated_decay Mus_musculus 0 905
ENSMUST00000190751 Nmbr-008 protein_coding Mus_musculus 0 472
ENSMUST00000190114 Nmbr-002 protein_coding Mus_musculus 0 444

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