C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 144B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259939 RNF144B-001 ENSG00000137393 9606 + 6:18387350-18468874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259939 6.148±0.00 3.526±0.00 2.816±0.00 1.335±0.29 3.697±1.70 1.643±0.71 2.185±0.90 5.567±1.58 1.787±0.32 7.959±0.01 6.502±0.96 0.992±0.52 4.317±0.72 3.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041Y CIL_00041Y_0001 CGP 6:18223868-18468874
CIL_0008X6 CIL_0008X6_0001 VISTA 6:18236397-18838036
CIL_0007V4 CIL_0007V4_0001 VISTA 6:18312419-18914609
CIL_00086E CIL_00086E_0001 VISTA 6:18362559-18963807
CIL_00041X CIL_00041X_0001 CGP 6:18387350-19840684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IC ubiquitin ligase complex
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0031966 IDA mitochondrial membrane
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110111 Rnf144b-202 protein_coding Mus_musculus 0 1016
ENSMUST00000068891 Rnf144b-201 protein_coding Mus_musculus 0 1016

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