C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00086E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1094 VISTA 9606 6:18362559-18963807
GeneTranscriptPositionBiotype
ENSG00000137393 (RNF144B)
ring finger protein 144B 		ENST00000259939 (RNF144B-001) 18387350-18468874 protein_coding
ENST00000486622 (RNF144B-002) 18387514-18402095 processed_transcript
ENSG00000217414 (RP11-528A10.2)
 ENST00000404856 (RP11-528A10.2-001) 18363417-18365423 processed_pseudogene
ENSG00000218976 (RP11-528A10.1)
 ENST00000407347 (RP11-528A10.1-001) 18366736-18368644 unprocessed_pseudogene
CIL_00086E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1094 VISTA 10090 13:47097122-47698796
GeneTranscriptPositionBiotype
ENSMUSG00000021377 (Dek)
DEK oncogene (DNA binding) 		ENSMUST00000021807 (Dek-001) 47084782-47106190 protein_coding
ENSMUST00000129352 (Dek-006) 47098155-47105830 protein_coding
ENSMUST00000135278 (Dek-002) 47088595-47106201 protein_coding
ENSMUST00000138401 (Dek-003) 47084775-47098438 processed_transcript
ENSMUST00000143933 (Dek-005) 47101487-47106154 processed_transcript
ENSMUST00000150652 (Dek-004) 47105381-47106183 processed_transcript
ENSMUSG00000038068 (Rnf144b)
ring finger protein 144B 		ENSMUST00000068891 (Rnf144b-201) 47122720-47247991 protein_coding
ENSMUST00000110111 (Rnf144b-202) 47194003-47247991 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086E_0001ENSG00000137393ENST00000259939ENST00000486622ENSG00000217414ENST00000404856ENSG00000218976ENST00000407347CIL_00086E_0002ENSMUSG00000021377ENSMUST00000021807ENSMUST00000129352ENSMUST00000135278ENSMUST00000138401ENSMUST00000143933ENSMUST00000150652ENSMUSG00000038068ENSMUST00000068891ENSMUST00000110111
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00086E_0001ENSG00000137393ENST00000259939ENSG00000217414ENST00000404856ENSG00000218976ENST00000407347CIL_00086E_0002ENSMUSG00000021377ENSMUST00000021807ENSMUST00000129352ENSMUST00000135278ENSMUST00000138401ENSMUST00000143933ENSMUST00000150652ENSMUSG00000038068ENSMUST00000068891ENSMUST00000110111
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137393 ENST00000259939 6.148±0.00 3.526±0.00 2.816±0.00 1.335±0.29 3.697±1.70 1.643±0.71 2.185±0.90 5.567±1.58 1.787±0.32 7.959±0.01 6.502±0.96 0.992±0.52 4.317±0.72 3.073±0.00
ENST00000486622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217414 ENST00000404856 N/A 0.011±0.00 N/A N/A 0.005±0.00 N/A N/A N/A N/A 0.005±0.00 0.241±0.00 0.013±0.00 N/A 0.132±0.06
ENSG00000218976 ENST00000407347 0.015±0.00 N/A N/A N/A 0.027±0.01 0.016±0.00 0.083±0.00 N/A N/A N/A 0.116±0.00 N/A 0.043±0.00 0.185±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021377 ENSMUST00000021807 1.417±0.63 N/A 23.149±3.61 17.429±1.42 3.332±1.63 3.530±1.15 1.061±0.48 2.697±0.39 58.895±65.03 4.818±1.68 4.950±2.28 7.070±6.34 24.501±8.95 2.099±0.99
ENSMUST00000129352 N/A N/A N/A 16.393±0.00 N/A N/A N/A N/A N/A N/A N/A 22.145±19.09 26.095±8.65 25.398±0.00
ENSMUST00000135278 N/A 29.738±15.56 N/A N/A 13.686±0.94 10.592±3.61 N/A 4.270±0.76 4.608±1.96 6.881±2.11 N/A 25.564±13.83 N/A 1.858±0.45
ENSMUST00000138401 1.497±1.03 N/A N/A 6.403±2.20 3.855±0.85 3.150±0.27 1.041±0.31 3.494±0.20 11.034±9.83 3.189±0.47 N/A 10.365±4.75 10.085±6.33 1.894±1.23
ENSMUST00000143933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.243±0.00
ENSMUST00000150652 N/A 32.807±8.78 N/A N/A 4.222±0.00 8.238±1.74 N/A 4.519±0.86 1.829±0.19 7.911±3.27 N/A 4.385±0.55 N/A N/A
ENSMUSG00000038068 ENSMUST00000068891 N/A N/A N/A 1.910±0.00 N/A N/A N/A N/A 1.161±0.68 N/A 1.069±0.12 1.839±0.97 1.395±0.00 1.768±0.52
ENSMUST00000110111 6.867±1.40 1.970±0.62 22.827±0.30 0.925±0.66 5.441±0.28 1.649±0.38 3.513±0.19 1.486±0.09 6.245±4.75 10.762±0.15 5.672±0.88 8.533±2.62 4.351±1.48 7.220±2.53

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