C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260045 PRKRIR-001 ENSG00000137492 9606 - 11:76349956-76380942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260045 3.915±0.00 6.144±0.00 2.852±0.00 2.338±0.26 4.108±1.16 4.776±0.13 1.739±0.58 3.450±1.39 1.962±0.31 3.527±0.28 2.267±0.00 7.089±1.80 8.449±2.09 8.353±1.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006950 TAS response to stress
GO:0007165 TAS signal transduction
GO:0008285 TAS negative regulation of cell proliferation
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033009 Prkrir-001 protein_coding Mus_musculus 0 2948
ENSMUST00000153566 Prkrir-004 nonsense_mediated_decay Mus_musculus 0 628
ENSMUST00000126356 Prkrir-002 nonsense_mediated_decay Mus_musculus 0 460
ENSMUST00000146473 Prkrir-003 processed_transcript Mus_musculus 0 368

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