C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084628 Hs3st2-201 ENSMUSG00000046321 10090 + 7:121392296-121501768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMusclePlacentaTestisENSMUST00000084628
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Placenta Testis
ENSMUST00000084628 0.488±0.11 0.026±0.02 5.721±4.00 0.018±0.01 0.557±0.05 0.021±0.00 0.014±0.01 0.015±0.00 0.018±0.00 0.379±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RG CIL_0008RG_0002 VISTA 7:120952178-121553246
CIL_0000A8 CIL_0000A8_0003 CGP 7:121392296-121707253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007623 IEA circadian rhythm
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0033871 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 2 activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261374 HS3ST2-001 protein_coding Homo_sapiens 0 1746
ENST00000284110 HS3ST3A1-001 protein_coding Homo_sapiens 0 388
ENST00000360954 HS3ST3B1-001 protein_coding Homo_sapiens 0 383
ENST00000466596 HS3ST3B1-002 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000473392 HS3ST2-002 nonsense_mediated_decay Homo_sapiens 0 797
ENST00000578576 HS3ST3A1-002 protein_coding Homo_sapiens 0 289

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