C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261503 SPECC1-018 ENSG00000128487 9606 + 17:20087022-20314755 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLungMuscleOvaryPlacentaENST00000261503
Transcript ID Adipose Brain Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000261503 1.226±0.00 4.868±0.00 1.244±0.00 0.809±0.00 0.744±0.00 2.081±0.00 0.376±0.00 2.453±1.50 1.162±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073H CIL_00073H_0001 CGP 17:19904302-20319026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0007155 IDA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108709 Specc1-201 protein_coding Mus_musculus 0 3014
ENSMUST00000092415 Specc1-002 protein_coding Mus_musculus 0 2813
ENSMUST00000049836 Specc1-001 protein_coding Mus_musculus 0 2091

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