C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: partner and localizer of BRCA2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261584 PALB2-001 ENSG00000083093 9606 - 16:23603170-23641310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261584
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261584 0.831±0.00 0.698±0.00 1.405±0.34 0.858±0.35 0.334±0.04 0.326±0.00 1.613±0.00 0.700±0.60 0.615±0.02 1.322±0.67 0.637±0.12 2.381±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VC CIL_0003VC_0002 CGP 16:23581002-23641310
CIL_0006D1 CIL_0006D1_0001 CGP 16:23603160-23677455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IDA double-strand break repair via homologous recombination
GO:0001756 IEA somitogenesis
GO:0001833 IEA inner cell mass cell proliferation
GO:0003677 IDA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0007498 IEA mesoderm development
GO:0009887 IEA organ morphogenesis
GO:0036342 IEA post-anal tail morphogenesis
GO:0043066 IEA negative regulation of apoptotic process

Homologs

No Homologs available.

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