C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UTP6, small subunit (SSU) processome component, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261708 UTP6-001 ENSG00000108651 9606 - 17:31860899-31901765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000261708
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000261708 0.888±0.00 3.625±0.00 0.698±0.08 1.217±0.37 0.776±0.00 0.531±0.08 2.068±0.00 0.777±0.00 0.716±0.20 2.275±0.19 1.237±0.14 1.901±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0001 CGP 17:31860899-32001045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043152 Utp6-001 protein_coding Mus_musculus 0 1847
ENSMUST00000108241 Utp6-002 protein_coding Mus_musculus 0 1847
ENSMUST00000146127 Utp6-003 retained_intron Mus_musculus 0 387

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