C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MCF.2 cell line derived transforming sequence-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261963 MCF2L-034 ENSG00000126217 9606 + 13:113087350-113098388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000261963
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000261963 16.212±0.00 3.333±0.00 14.405±0.00 4.391±2.41 7.295±0.00 5.649±0.00 8.437±0.00 0.921±0.06 1.953±0.00 2.267±0.99 2.013±1.30 1.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014E CIL_00014E_0001 CGP 13:112690329-113099739
CIL_0000RV CIL_0000RV_0001 CGP 13:112894378-113120681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123811 Mcf2l-022 protein_coding Mus_musculus 0 765
ENSMUST00000110879 Mcf2l-014 protein_coding Mus_musculus 0 765
ENSMUST00000110866 Mcf2l-004 protein_coding Mus_musculus 0 689
ENSMUST00000110867 Mcf2l-003 protein_coding Mus_musculus 0 689
ENSMUST00000095456 Mcf2l-009 protein_coding Mus_musculus 0 689
ENSMUST00000098927 Mcf2l-019 protein_coding Mus_musculus 0 625
ENSMUST00000173099 Mcf2l-016 protein_coding Mus_musculus 0 625
ENSMUST00000110873 Mcf2l-018 protein_coding Mus_musculus 0 566
ENSMUST00000126905 Mcf2l-008 protein_coding Mus_musculus 0 457
ENSMUST00000145067 Mcf2l-006 protein_coding Mus_musculus 0 457
ENSMUST00000110871 Mcf2l-017 protein_coding Mus_musculus 0 457
ENSMUST00000110876 Mcf2l-001 protein_coding Mus_musculus 0 457
ENSMUST00000134227 Mcf2l-015 protein_coding Mus_musculus 0 433

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