C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol 3-kinase, catalytic subunit type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262039 PIK3C3-001 ENSG00000078142 9606 + 18:41955206-42087830 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000262039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000262039 1.526±0.00 2.590±0.00 0.772±0.00 4.761±0.61 1.681±0.49 1.077±0.04 0.922±0.55 0.725±0.00 1.278±0.91 0.978±0.28 1.175±0.52 0.940±0.60 1.608±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VI CIL_0003VI_0001 CGP 18:37243047-42087830
CIL_0006XU CIL_0006XU_0001 CGP 18:41955206-43115691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0000910 IMP cytokinesis
GO:0002224 TAS toll-like receptor signaling pathway
GO:0004672 IEA protein kinase activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005770 IDA late endosome
GO:0005829 TAS cytosol
GO:0005930 ISS axoneme
GO:0005942 IBA phosphatidylinositol 3-kinase complex
GO:0006468 IEA protein phosphorylation
GO:0006644 TAS phospholipid metabolic process
GO:0006661 TAS phosphatidylinositol biosynthetic process
GO:0007032 IEA endosome organization
GO:0008286 TAS insulin receptor signaling pathway
GO:0016020 IDA membrane
GO:0016303 IMP:IEA 1-phosphatidylinositol-3-kinase activity
GO:0016485 IEA protein processing
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0030496 IDA midbody
GO:0034162 TAS toll-like receptor 9 signaling pathway
GO:0035004 IEA phosphatidylinositol 3-kinase activity
GO:0036092 IEA phosphatidylinositol-3-phosphate biosynthetic process
GO:0043201 IEA response to leucine
GO:0044281 TAS small molecule metabolic process
GO:0045022 IMP early endosome to late endosome transport
GO:0045087 TAS innate immune response
GO:0045335 IEA phagocytic vesicle
GO:0046854 IEA phosphatidylinositol phosphorylation
GO:0048015 IEA phosphatidylinositol-mediated signaling
GO:0050708 IEA regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115812 Pik3c3-001 protein_coding Mus_musculus 0 3160
ENSMUST00000091978 Pik3c3-003 protein_coding Mus_musculus 0 2953
ENSMUST00000115811 Pik3c3-004 protein_coding Mus_musculus 0 2623
ENSMUST00000131405 Pik3c3-002 nonsense_mediated_decay Mus_musculus 0 1794
ENSDART00000101265 pik3c3-001 protein_coding Danio_rerio 0 758
ENSDART00000127155 pik3c3-002 nonsense_mediated_decay Danio_rerio 5.60519e-45 189

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