C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028633 Fbn1-001 ENSMUSG00000027204 10090 - 2:125300594-125506385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028633 35.321±1.45 3.089±0.25 9.136±1.56 1.573±0.71 25.622±2.99 8.391±1.83 8.424±0.62 3.426±0.20 0.623±0.33 15.912±1.43 2.190±1.01 18.072±2.10 4.872±2.15 0.631±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0002 VISTA 2:125191395-125793910
CIL_0004NG CIL_0004NG_0002 CGP 2:125247190-125507993

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001527 TAS microfibril
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000073604 fbn2a-201 protein_coding Danio_rerio 0 220
ENSDART00000149104 fbn2a-001 protein_coding Danio_rerio 4e-36 159
ENST00000262464 FBN2-201 protein_coding Homo_sapiens 0 854
ENST00000316623 FBN1-001 protein_coding Homo_sapiens 0 11380
ENST00000507835 FBN2-006 protein_coding Homo_sapiens 0 379
ENST00000508053 FBN2-001 protein_coding Homo_sapiens 0 854
ENST00000508989 FBN2-005 protein_coding Homo_sapiens 0 604
ENST00000537463 FBN1-003 nonsense_mediated_decay Homo_sapiens 0 3432
ENST00000558230 FBN1-006 processed_transcript Homo_sapiens 0 198
ENST00000559133 FBN1-004 nonsense_mediated_decay Homo_sapiens 0 2787
ENST00000560355 FBN1-002 protein_coding Homo_sapiens 0 198
ENST00000560820 FBN1-007 retained_intron Homo_sapiens 0 529
ENST00000561429 FBN1-009 processed_transcript Homo_sapiens 0 656
ENST00000619499 FBN2-202 protein_coding Homo_sapiens 0 854

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