C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | fibrillin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000103234  |
Fbn1-003 |
ENSMUSG00000027204 |
10090 | - |
2:125300627-125507993  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008GC | CIL_0008GC_0002 | VISTA | 2:125191395-125793910 |
| CIL_0004NG | CIL_0004NG_0002 | CGP | 2:125247190-125507993 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001501 | IEA | skeletal system development |
| GO:0001527 | TAS | microfibril |
| GO:0001656 | IEA | metanephros development |
| GO:0001822 | IEA | kidney development |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005515 | IPI | protein binding |
| GO:0005576 | IEA | extracellular region |
| GO:0005604 | IEA | basement membrane |
| GO:0005615 | IEA | extracellular space |
| GO:0007507 | IEA | heart development |
| GO:0031012 | IDA | extracellular matrix |
| GO:0070062 | IEA | extracellular vesicular exosome |
| GO:0071560 | IEA | cellular response to transforming growth factor beta stimulus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000073604
|
fbn2a-201 | protein_coding | Danio_rerio | 0 | 220 |
|
ENSDART00000149104
|
fbn2a-001 | protein_coding | Danio_rerio | 5e-36 | 159 |
|
ENST00000262464
|
FBN2-201 | protein_coding | Homo_sapiens | 0 | 854 |
|
ENST00000316623
|
FBN1-001 | protein_coding | Homo_sapiens | 0 | 11350 |
|
ENST00000507835
|
FBN2-006 | protein_coding | Homo_sapiens | 0 | 379 |
|
ENST00000508053
|
FBN2-001 | protein_coding | Homo_sapiens | 0 | 854 |
|
ENST00000508989
|
FBN2-005 | protein_coding | Homo_sapiens | 0 | 604 |
|
ENST00000537463
|
FBN1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 3432 |
|
ENST00000558230
|
FBN1-006 | processed_transcript | Homo_sapiens | 0 | 198 |
|
ENST00000559133
|
FBN1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 2787 |
|
ENST00000560355
|
FBN1-002 | protein_coding | Homo_sapiens | 0 | 198 |
|
ENST00000560820
|
FBN1-007 | retained_intron | Homo_sapiens | 0 | 529 |
|
ENST00000561429
|
FBN1-009 | processed_transcript | Homo_sapiens | 0 | 656 |
|
ENST00000619499
|
FBN2-202 | protein_coding | Homo_sapiens | 0 | 854 |
