C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262577 ZC3H3-001 ENSG00000014164 9606 - 8:143437655-143541453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262577
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262577 6.128±0.00 7.590±0.00 2.178±2.00 2.970±2.19 2.205±2.03 2.982±0.00 7.169±0.00 1.967±1.41 3.597±2.45 8.447±7.47 7.076±5.51 5.915±2.73 11.623±5.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0000X0 CIL_0000X0_0002 CGP 8:143419182-143541453
CIL_0001NJ CIL_0001NJ_0001 CGP 8:143437655-143563062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0006378 IMP mRNA polyadenylation
GO:0010793 IMP regulation of mRNA export from nucleus
GO:0016973 IMP poly(A)+ mRNA export from nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100538 Zc3h3-201 protein_coding Mus_musculus 0 1810
ENSMUST00000181324 AC132586.1-201 protein_coding Mus_musculus 0 1784
ENSMUST00000069044 Gm7353-201 protein_coding Mus_musculus 0 1784

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