C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB2A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262646 RAB2A-001 ENSG00000104388 9606 + 8:60516857-60623627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262646
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262646 2.780±0.00 2.888±0.00 9.228±4.06 7.411±1.70 5.589±0.00 3.162±0.00 4.158±0.00 6.645±0.00 4.284±1.41 2.801±0.00 7.905±3.94 13.390±8.48 13.275±6.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G7 CIL_0003G7_0001 CGP 8:60187347-60623627
CIL_000379 CIL_000379_0001 CGP 8:60516857-60868028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000278 TAS mitotic cell cycle
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007030 IMP Golgi organization
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060232 Rab2a-001 protein_coding Mus_musculus 0 2423

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