C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin fusion degradation 1 like (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263202 UFD1L-001 ENSG00000070010 9606 - 22:19449910-19479215 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyMuscleENST00000263202
Transcript ID Breast Kidney Muscle
ENST00000263202 3.046±0.00 3.538±0.00 3.084±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0004843 TAS ubiquitin-specific protease activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006511 IEA:TAS ubiquitin-dependent protein catabolic process
GO:0032403 IEA protein complex binding
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005394 Ufd1l-201 protein_coding Mus_musculus 0 1223
ENSMUST00000115578 Ufd1l-001 protein_coding Mus_musculus 0 1223
ENSMUST00000172013 Ufd1l-002 nonsense_mediated_decay Mus_musculus 0 966
ENSMUST00000170325 Ufd1l-007 retained_intron Mus_musculus 0 265
ENSMUST00000166352 Ufd1l-005 retained_intron Mus_musculus 0 263
ENSMUST00000163695 Ufd1l-003 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000171789 Ufd1l-009 nonsense_mediated_decay Mus_musculus 1e-39 169
ENSMUST00000164795 Ufd1l-004 processed_transcript Mus_musculus 1e-39 169
ENSMUST00000168822 Ufd1l-008 protein_coding Mus_musculus 2e-37 161

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