C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin fusion degradation 1 like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000163695  |
Ufd1l-003 |
ENSMUSG00000005262 |
10090 | + |
16:18812356-18825042  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00095F | CIL_00095F_0002 | VISTA | 16:18254168-18857637 |
| CIL_00099J | CIL_00099J_0002 | VISTA | 16:18285741-18886132 |
| CIL_0008BW | CIL_0008BW_0002 | VISTA | 16:18293232-18893684 |
| CIL_0000RN | CIL_0000RN_0002 | CGP | 16:18776847-18811987 |
| CIL_0006PK | CIL_0006PK_0002 | CGP | 16:18780447-18835261 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IDA | cytoplasm |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000263202
|
UFD1L-001 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000399523
|
UFD1L-003 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000421968
|
UFD1L-006 | protein_coding | Homo_sapiens | 0 | 217 |
|
ENST00000459854
|
UFD1L-002 | retained_intron | Homo_sapiens | 3e-39 | 169 |
|
ENST00000484101
|
UFD1L-005 | processed_transcript | Homo_sapiens | 0 | 254 |
|
ENST00000489406
|
UFD1L-010 | retained_intron | Homo_sapiens | 0 | 261 |
|
ENST00000494054
|
UFD1L-009 | protein_coding | Homo_sapiens | 0 | 252 |
|
ENST00000583051
|
RP11-552O4.2-001 | processed_pseudogene | Homo_sapiens | 0 | 220 |
