C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263897 USE1-004 ENSG00000053501 9606 + 19:17215359-17219829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263897 9.401±0.00 12.639±0.00 0.529±0.00 7.541±5.46 14.649±0.00 7.113±5.65 5.919±5.41 7.299±4.30 10.509±0.00 5.567±2.93 14.634±0.00 22.287±13.15 21.301±2.26 11.955±4.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GE CIL_0006GE_0001 CGP 19:17075781-17219829
CIL_0007CI CIL_0007CI_0001 CGP 19:17215346-17229219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0007029 IEA endoplasmic reticulum organization
GO:0007041 ISS lysosomal transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030163 ISS protein catabolic process
GO:0032940 ISS secretion by cell
GO:0060628 IEA regulation of ER to Golgi vesicle-mediated transport
GO:0071786 IEA endoplasmic reticulum tubular network organization

Homologs

No Homologs available.

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