C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000053501-ENSG00000099330 CGP 9606 19:17215346-17229219
GeneTranscriptPositionBiotype
ENSG00000053501 (USE1)
unconventional SNARE in the ER 1 homolog (S. cerevisiae) 		ENST00000263897 (USE1-004) 17215359-17219829 protein_coding
ENST00000445667 (USE1-201) 17215398-17219829 protein_coding
ENST00000593597 (USE1-008) 17215720-17219640 protein_coding
ENST00000594399 (USE1-009) 17215829-17217670 retained_intron
ENST00000594724 (USE1-007) 17215398-17219819 nonsense_mediated_decay
ENST00000595101 (USE1-002) 17215388-17218826 protein_coding
ENST00000596136 (USE1-001) 17215390-17219829 protein_coding
ENST00000600970 (USE1-003) 17215375-17219829 nonsense_mediated_decay
ENST00000601592 (USE1-006) 17215392-17217489 retained_intron
ENST00000601662 (USE1-005) 17215346-17217617 nonsense_mediated_decay
ENSG00000099330 (OCEL1)
occludin/ELL domain containing 1 		ENST00000215061 (OCEL1-001) 17226204-17229219 protein_coding
ENST00000594283 (OCEL1-007) 17226243-17229202 retained_intron
ENST00000595573 (OCEL1-014) 17228254-17229215 protein_coding
ENST00000595769 (OCEL1-013) 17227158-17228943 retained_intron
ENST00000596279 (OCEL1-010) 17226782-17228513 retained_intron
ENST00000597836 (OCEL1-009) 17226615-17229165 protein_coding
ENST00000598068 (OCEL1-003) 17226740-17229215 protein_coding
ENST00000598172 (OCEL1-011) 17226839-17228705 nonsense_mediated_decay
ENST00000599286 (OCEL1-012) 17227043-17229218 nonsense_mediated_decay
ENST00000599588 (OCEL1-002) 17226226-17229213 retained_intron
ENST00000600232 (OCEL1-008) 17226253-17229219 protein_coding
ENST00000600826 (OCEL1-015) 17228256-17229215 protein_coding
ENST00000601529 (OCEL1-006) 17226225-17229215 protein_coding
ENST00000601576 (OCEL1-005) 17226222-17227943 processed_transcript
ENST00000602236 (OCEL1-004) 17226213-17227199 processed_transcript
CIL_0007CI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002395-ENSMUSG00000002396 CGP 10090 8:71366848-71379361
GeneTranscriptPositionBiotype
ENSMUSG00000002393 (Nr2f6)
nuclear receptor subfamily 2, group F, member 6 		ENSMUST00000002466 (Nr2f6-001) 71374127-71381960 protein_coding
ENSMUST00000124732 (Nr2f6-007) 71375752-71381090 protein_coding
ENSMUST00000127443 (Nr2f6-008) 71375752-71380909 processed_transcript
ENSMUST00000132630 (Nr2f6-002) 71374123-71381906 processed_transcript
ENSMUST00000137058 (Nr2f6-006) 71375819-71381177 protein_coding
ENSMUST00000137734 (Nr2f6-003) 71374628-71375790 processed_transcript
ENSMUST00000155463 (Nr2f6-005) 71374653-71375790 processed_transcript
ENSMUST00000156270 (Nr2f6-004) 71375118-71375790 processed_transcript
ENSMUSG00000002395 (Use1)
unconventional SNARE in the ER 1 homolog (S. cerevisiae) 		ENSMUST00000019169 (Use1-001) 71367217-71369732 protein_coding
ENSMUST00000110053 (Use1-201) 71366848-71369729 protein_coding
ENSMUST00000110054 (Use1-002) 71366942-71369732 protein_coding
ENSMUST00000127517 (Use1-011) 71367641-71368214 retained_intron
ENSMUST00000136368 (Use1-007) 71367243-71368998 retained_intron
ENSMUST00000137137 (Use1-009) 71368792-71369671 retained_intron
ENSMUST00000139541 (Use1-010) 71367005-71367806 protein_coding
ENSMUST00000140236 (Use1-005) 71367780-71369732 retained_intron
ENSMUST00000142685 (Use1-008) 71367384-71368685 retained_intron
ENSMUST00000143657 (Use1-004) 71367217-71369732 retained_intron
ENSMUST00000146221 (Use1-006) 71367243-71368831 retained_intron
ENSMUST00000154550 (Use1-003) 71367217-71369732 retained_intron
ENSMUSG00000002396 (Ocel1)
occludin/ELL domain containing 1 		ENSMUST00000002469 (Ocel1-001) 71371339-71373689 protein_coding
ENSMUST00000110051 (Ocel1-002) 71371298-71374382 protein_coding
ENSMUST00000110052 (Ocel1-003) 71371346-71379361 protein_coding
ENSMUST00000126049 (Ocel1-004) 71372473-71372955 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CI_0001ENSG00000053501ENST00000263897ENST00000445667ENST00000593597ENST00000594399ENST00000594724ENST00000595101ENST00000596136ENST00000600970ENST00000601592ENST00000601662ENSG00000099330ENST00000215061ENST00000594283ENST00000595573ENST00000595769ENST00000596279ENST00000597836ENST00000598068ENST00000598172ENST00000599286ENST00000599588ENST00000600232ENST00000600826ENST00000601529ENST00000601576ENST00000602236CIL_0007CI_0002ENSMUSG00000002393ENSMUST00000002466ENSMUST00000124732ENSMUST00000127443ENSMUST00000132630ENSMUST00000137058ENSMUST00000137734ENSMUST00000155463ENSMUST00000156270ENSMUSG00000002395ENSMUST00000019169ENSMUST00000110053ENSMUST00000110054ENSMUST00000127517ENSMUST00000136368ENSMUST00000137137ENSMUST00000139541ENSMUST00000140236ENSMUST00000142685ENSMUST00000143657ENSMUST00000146221ENSMUST00000154550ENSMUSG00000002396ENSMUST00000002469ENSMUST00000110051ENSMUST00000110052ENSMUST00000126049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CI_0001ENSG00000053501ENST00000263897ENST00000445667ENST00000593597ENST00000594724ENST00000595101ENST00000600970ENST00000601592ENST00000601662ENSG00000099330ENST00000215061ENST00000594283ENST00000595573ENST00000595769ENST00000596279ENST00000597836ENST00000598068ENST00000598172ENST00000599286ENST00000599588ENST00000600232ENST00000600826ENST00000601529ENST00000601576CIL_0007CI_0002ENSMUSG00000002393ENSMUST00000002466ENSMUST00000127443ENSMUST00000137058ENSMUST00000156270ENSMUSG00000002395ENSMUST00000019169ENSMUST00000110054ENSMUST00000137137ENSMUST00000140236ENSMUST00000142685ENSMUST00000143657ENSMUST00000154550ENSMUSG00000002396ENSMUST00000002469ENSMUST00000110051ENSMUST00000110052
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000053501 ENST00000263897 9.401±0.00 12.639±0.00 0.529±0.00 7.541±5.46 14.649±0.00 7.113±5.65 5.919±5.41 7.299±4.30 10.509±0.00 5.567±2.93 14.634±0.00 22.287±13.15 21.301±2.26 11.955±4.41
ENST00000445667 N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A 0.146±0.00 N/A N/A
ENST00000593597 N/A N/A N/A N/A 4.628±3.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594724 4.567±0.00 15.358±0.00 0.258±0.00 11.444±5.40 8.372±5.57 6.366±5.24 3.752±0.00 8.279±0.00 7.628±6.64 2.022±1.52 18.634±0.00 N/A N/A 13.953±0.00
ENST00000595101 N/A 2.010±0.00 N/A N/A N/A N/A N/A 0.451±0.00 0.110±0.00 N/A N/A N/A N/A 1.226±0.01
ENST00000596136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600970 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.065±0.00 N/A N/A N/A N/A
ENST00000601592 N/A N/A 0.329±0.00 N/A N/A N/A 0.200±0.00 N/A 1.599±0.00 N/A 0.848±0.00 1.007±0.00 N/A N/A
ENST00000601662 N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000099330 ENST00000215061 2.258±0.00 1.726±0.00 N/A 2.058±1.27 4.317±0.00 3.824±0.00 N/A N/A N/A N/A N/A 3.266±2.38 3.165±0.40 4.456±0.00
ENST00000594283 1.966±0.00 2.062±0.00 0.444±0.00 2.878±0.00 5.967±0.00 N/A N/A 3.923±2.01 5.846±0.00 4.234±0.00 N/A 5.390±0.51 4.226±1.14 3.440±0.00
ENST00000595573 N/A N/A N/A N/A 1.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595769 N/A N/A N/A N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A 2.654±0.00 N/A
ENST00000596279 N/A N/A 0.267±0.00 0.302±0.00 N/A N/A N/A N/A N/A N/A N/A 0.636±0.00 N/A N/A
ENST00000597836 2.116±0.00 3.532±0.00 N/A N/A N/A 2.998±0.00 2.084±0.00 N/A 11.029±0.00 2.837±0.00 3.089±0.00 3.105±0.00 2.015±0.00 1.781±0.00
ENST00000598068 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.859±0.00 N/A N/A 1.732±0.00 1.509±0.00
ENST00000598172 N/A N/A N/A N/A N/A N/A N/A N/A 0.651±0.00 0.185±0.00 N/A N/A N/A N/A
ENST00000599286 N/A N/A N/A N/A 0.385±0.00 N/A N/A N/A N/A N/A N/A 5.992±0.00 N/A N/A
ENST00000599588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.697±0.00 N/A N/A
ENST00000600232 N/A N/A N/A N/A 5.545±5.07 3.924±0.00 3.741±0.00 8.187±3.86 13.956±0.00 6.746±0.00 4.524±0.00 4.972±0.00 9.585±1.46 N/A
ENST00000600826 N/A 4.094±0.00 N/A 6.124±0.00 N/A 1.631±0.00 0.794±0.00 N/A N/A N/A 3.306±1.26 N/A N/A N/A
ENST00000601529 3.331±0.00 3.608±0.00 N/A 3.348±0.00 4.866±0.00 N/A 3.000±0.00 N/A N/A N/A 2.763±0.00 3.369±0.00 3.479±0.00 N/A
ENST00000601576 N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A 0.817±0.00 N/A N/A N/A
ENST00000602236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002393 ENSMUST00000002466 50.477±20.49 91.165±23.30 39.323±6.32 16.262±6.83 63.467±16.13 129.194±8.81 23.526±3.34 90.320±19.93 63.144±36.64 57.815±11.91 8.349±2.93 103.090±40.14 24.054±13.10 4.338±0.33
ENSMUST00000124732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 88.322±0.00 N/A N/A
ENSMUST00000132630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137058 N/A N/A N/A 11.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156270 N/A N/A N/A N/A 23.435±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000002395 ENSMUST00000019169 38.942±2.05 21.028±2.13 109.730±5.26 63.997±25.74 41.834±13.04 51.527±13.58 39.500±4.67 49.701±10.17 40.781±12.29 49.101±1.31 31.864±3.52 86.432±41.42 63.680±15.29 57.004±16.52
ENSMUST00000110053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110054 N/A N/A N/A N/A N/A N/A N/A N/A 4.937±0.00 N/A 6.892±1.09 N/A 13.641±0.00 17.701±3.18
ENSMUST00000127517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137137 N/A 13.543±2.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.458±0.91 N/A N/A
ENSMUST00000139541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140236 N/A N/A N/A 12.465±1.18 7.744±0.00 N/A N/A N/A N/A N/A N/A 18.749±0.00 N/A N/A
ENSMUST00000142685 11.599±0.74 6.374±1.75 N/A 14.343±0.00 12.876±0.00 N/A N/A 8.647±0.00 7.288±0.00 N/A N/A 18.154±3.41 N/A N/A
ENSMUST00000143657 N/A N/A N/A N/A 3.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154550 11.628±2.92 5.155±0.00 N/A N/A N/A 8.449±0.29 11.388±3.47 9.089±0.85 6.448±0.00 N/A 13.216±2.63 N/A N/A 17.390±0.87
ENSMUSG00000002396 ENSMUST00000002469 8.684±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.438±0.00 11.039±3.98
ENSMUST00000110051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.920±0.00 N/A N/A 7.443±3.61
ENSMUST00000110052 3.572±1.60 N/A 3.599±1.58 2.194±0.67 5.410±0.78 14.160±0.00 2.015±0.06 6.376±0.00 4.449±2.11 4.810±0.22 0.967±0.30 2.808±0.18 1.840±0.72 0.158±0.00
ENSMUST00000126049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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