C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264156 MCM6-001 ENSG00000076003 9606 - 2:135839626-135876426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264156 2.111±0.00 8.101±0.00 0.478±0.00 2.950±1.69 2.166±0.67 2.045±0.00 0.828±0.67 3.704±0.00 0.583±0.00 3.540±0.00 1.303±0.22 11.799±8.20 9.764±6.18 9.927±2.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VU CIL_0006VU_0001 CGP 2:135787840-135876426
CIL_0003NC CIL_0003NC_0001 CGP 2:135839626-135986100

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0003697 IEA single-stranded DNA binding
GO:0004003 IDA ATP-dependent DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 NAS:IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006260 NAS:IEA DNA replication
GO:0006268 IEA DNA unwinding involved in DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016851 IEA magnesium chelatase activity
GO:0042555 IDA MCM complex
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027601 Mcm6-001 protein_coding Mus_musculus 0 2972
ENSMUST00000190495 Mcm6-004 protein_coding Mus_musculus 0 2819
ENSMUST00000191454 Mcm6-003 retained_intron Mus_musculus 0 736
ENSDART00000000042 mcm6l-001 protein_coding Danio_rerio 0 671

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