C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027601 Mcm6-001 ENSMUSG00000026355 10090 - 1:128331590-128359664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027601 8.565±7.36 5.113±0.47 6.828±1.48 12.848±8.31 7.518±1.62 6.366±1.04 1.473±0.10 3.976±1.08 44.416±48.44 5.214±0.58 0.586±0.17 13.687±5.05 29.634±16.36 4.394±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VU CIL_0006VU_0002 CGP 1:128284756-128359664
CIL_0003NC CIL_0003NC_0002 CGP 1:128331590-128417368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003678 IDA DNA helicase activity
GO:0003697 IPI single-stranded DNA binding
GO:0004003 ISS ATP-dependent DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006268 IPI DNA unwinding involved in DNA replication
GO:0006270 IEA DNA replication initiation
GO:0007049 IEA cell cycle
GO:0042555 ISS MCM complex
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000000042 mcm6l-001 protein_coding Danio_rerio 0 693
ENST00000264156 MCM6-001 protein_coding Homo_sapiens 0 2972
ENST00000492091 MCM6-003 processed_transcript Homo_sapiens 0 566

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