C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264161 DARS-001 ENSG00000115866 9606 - 2:135906677-135985684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264161
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264161 16.694±0.00 23.820±0.00 8.826±1.91 11.417±3.08 17.866±9.05 9.832±4.12 14.296±5.48 11.551±2.93 9.838±1.53 9.599±7.16 23.484±2.12 17.262±3.68 11.962±6.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NC CIL_0003NC_0001 CGP 2:135839626-135986100
CIL_00077L CIL_00077L_0001 CGP 2:135906677-136118165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004046 TAS aminoacylase activity
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004815 IEA aspartate-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA:IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006422 IEA aspartyl-tRNA aminoacylation
GO:0006461 TAS protein complex assembly
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027602 Dars-001 protein_coding Mus_musculus 0 2193
ENSDART00000102472 dars-201 protein_coding Danio_rerio 0 837
ENSMUST00000064309 Dars-003 protein_coding Mus_musculus 0 390
ENSMUST00000186398 Dars-002 retained_intron Mus_musculus 0 381
ENSDART00000130065 dars-202 protein_coding Danio_rerio 0 289

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