C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115866-ENSG00000121966 CGP 9606 2:135906677-136118165
GeneTranscriptPositionBiotype
ENSG00000115866 (DARS)
aspartyl-tRNA synthetase 		ENST00000264161 (DARS-001) 135906677-135985684 protein_coding
ENST00000422708 (DARS-009) 135907260-135920553 protein_coding
ENST00000435076 (DARS-005) 135943179-135985563 nonsense_mediated_decay
ENST00000441323 (DARS-004) 135924418-135985884 protein_coding
ENST00000449218 (DARS-003) 135933909-135985897 protein_coding
ENST00000456565 (DARS-002) 135924437-135986100 protein_coding
ENST00000463008 (DARS-012) 135943386-135980551 processed_transcript
ENST00000474184 (DARS-008) 135978987-135983447 retained_intron
ENST00000478212 (DARS-006) 135906824-135911617 retained_intron
ENST00000489964 (DARS-010) 135907244-135914866 retained_intron
ENST00000491481 (DARS-011) 135910848-135912559 retained_intron
ENST00000537273 (DARS-201) 135907262-135985492 protein_coding
ENSG00000121966 (CXCR4)
chemokine (C-X-C motif) receptor 4 		ENST00000241393 (CXCR4-001) 136114351-136118165 protein_coding
ENST00000409817 (CXCR4-003) 136114349-136116243 protein_coding
ENST00000466288 (CXCR4-002) 136114637-136117737 processed_transcript
CIL_00077L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026356-ENSMUSG00000045382 CGP 10090 1:128363707-128592293
GeneTranscriptPositionBiotype
ENSMUSG00000026356 (Dars)
aspartyl-tRNA synthetase 		ENSMUST00000027602 (Dars-001) 128363707-128417359 protein_coding
ENSMUST00000064309 (Dars-003) 128412118-128417368 protein_coding
ENSMUST00000186398 (Dars-002) 128374891-128379487 retained_intron
ENSMUSG00000045382 (Cxcr4)
chemokine (C-X-C motif) receptor 4 		ENSMUST00000052172 (Cxcr4-001) 128588199-128592290 protein_coding
ENSMUST00000142893 (Cxcr4-002) 128589099-128592293 protein_coding
ENSMUSG00000100078 (RP23-307G23.3)
predicted gene 6170 		ENSMUST00000187672 (RP23-307G23.3-001) 128520073-128521460 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077L_0001ENSG00000115866ENST00000264161ENST00000422708ENST00000435076ENST00000441323ENST00000449218ENST00000456565ENST00000463008ENST00000474184ENST00000478212ENST00000489964ENST00000491481ENST00000537273ENSG00000121966ENST00000241393ENST00000409817ENST00000466288CIL_00077L_0002ENSMUSG00000026356ENSMUST00000027602ENSMUST00000064309ENSMUST00000186398ENSMUSG00000045382ENSMUST00000052172ENSMUST00000142893ENSMUSG00000100078ENSMUST00000187672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077L_0001ENSG00000115866ENST00000264161ENST00000435076ENST00000489964ENST00000537273ENSG00000121966ENST00000241393ENST00000409817CIL_00077L_0002ENSMUSG00000026356ENSMUST00000027602ENSMUST00000064309ENSMUSG00000045382ENSMUST00000052172ENSMUST00000142893ENSMUSG00000100078ENSMUST00000187672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115866 ENST00000264161 16.694±0.00 23.820±0.00 N/A 8.826±1.91 11.417±3.08 17.866±9.05 9.832±4.12 14.296±5.48 11.551±2.93 9.838±1.53 9.599±7.16 23.484±2.12 17.262±3.68 11.962±6.67
ENST00000422708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.663±0.00 17.360±0.00 7.624±0.00
ENST00000441323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489964 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.004±0.00 N/A N/A N/A N/A
ENST00000491481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537273 12.654±0.00 10.217±0.00 7.517±0.00 10.745±0.73 11.495±2.84 10.489±1.82 7.530±0.84 8.114±0.38 11.257±6.99 9.352±3.18 11.951±0.00 17.492±8.51 7.521±2.80 4.547±0.00
ENSG00000121966 ENST00000241393 30.603±0.00 179.648±0.00 N/A 1.327±0.05 6.537±0.08 5.842±2.40 1.539±0.73 3.437±1.76 6.253±2.18 39.318±19.95 1.629±0.35 15.105±8.51 23.372±3.01 7.606±1.05
ENST00000409817 N/A N/A 1.660±0.00 N/A 1.948±0.00 N/A N/A N/A N/A 4.484±0.00 N/A N/A N/A N/A
ENST00000466288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026356 ENSMUST00000027602 17.201±3.16 6.604±1.13 22.085±2.42 15.207±5.41 11.321±1.51 5.568±0.96 12.350±0.98 16.440±1.16 26.892±13.36 11.632±1.26 21.575±1.27 12.479±6.92 27.538±11.08 16.176±5.09
ENSMUST00000064309 N/A 13.533±6.11 N/A N/A N/A 5.604±1.18 N/A N/A N/A 5.520±0.00 N/A 7.949±2.17 N/A N/A
ENSMUST00000186398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045382 ENSMUST00000052172 6.818±0.92 6.703±3.48 1.894±0.29 8.261±5.96 12.043±3.09 3.188±0.73 3.266±0.52 2.085±0.49 4.167±4.85 33.793±5.45 1.114±0.59 4.079±0.92 1.065±0.57 1.256±0.53
ENSMUST00000142893 N/A N/A 1.184±0.00 7.834±0.00 N/A 1.938±0.03 N/A 1.345±0.00 2.048±1.95 31.258±0.00 0.555±0.10 3.818±0.59 1.286±0.51 1.617±0.00
ENSMUSG00000100078 ENSMUST00000187672 0.983±0.32 0.149±0.05 9.569±2.41 1.253±1.12 1.074±0.95 0.552±0.17 0.178±0.05 0.596±0.19 0.883±1.56 0.679±0.27 0.052±0.03 0.545±0.32 0.253±0.19 0.395±0.25

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