C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027602 Dars-001 ENSMUSG00000026356 10090 - 1:128363707-128417359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027602
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027602 17.201±3.16 6.604±1.13 22.085±2.42 15.207±5.41 11.321±1.51 5.568±0.96 12.350±0.98 16.440±1.16 26.892±13.36 11.632±1.26 21.575±1.27 12.479±6.92 27.538±11.08 16.176±5.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NC CIL_0003NC_0002 CGP 1:128331590-128417368
CIL_00077L CIL_00077L_0002 CGP 1:128363707-128592293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004815 IEA aspartate-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006422 IEA aspartyl-tRNA aminoacylation
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102472 dars-201 protein_coding Danio_rerio 0 826
ENSDART00000130065 dars-202 protein_coding Danio_rerio 0 311
ENST00000264161 DARS-001 protein_coding Homo_sapiens 0 2193
ENST00000422708 DARS-009 protein_coding Homo_sapiens 0 383
ENST00000435076 DARS-005 nonsense_mediated_decay Homo_sapiens 0 673
ENST00000441323 DARS-004 protein_coding Homo_sapiens 0 826
ENST00000449218 DARS-003 protein_coding Homo_sapiens 0 601
ENST00000456565 DARS-002 protein_coding Homo_sapiens 0 791
ENST00000463008 DARS-012 processed_transcript Homo_sapiens 0 401
ENST00000478212 DARS-006 retained_intron Homo_sapiens 0 383
ENST00000489964 DARS-010 retained_intron Homo_sapiens 0 575
ENST00000491481 DARS-011 retained_intron Homo_sapiens 0 401
ENST00000537273 DARS-201 protein_coding Homo_sapiens 0 1919

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