C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latexin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264265 LXN-001 ENSG00000079257 9606 - 3:158666414-158672693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000264265
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000264265 9.638±0.00 11.430±0.00 6.917±1.22 7.713±2.07 10.047±0.00 2.847±0.00 15.620±0.00 12.628±6.62 7.516±3.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KO CIL_0008KO_0001 VISTA 3:158067861-158669043
CIL_000808 CIL_000808_0001 VISTA 3:158183764-158784540
CIL_000815 CIL_000815_0001 VISTA 3:158228062-158828791
CIL_000937 CIL_000937_0001 VISTA 3:158468467-159075583
CIL_0004JV CIL_0004JV_0002 CGP 3:158571163-158692575
CIL_0004JU CIL_0004JU_0002 CGP 3:158644278-158692575
CIL_0001ZA CIL_0001ZA_0001 CGP 3:158645822-158732696

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006954 IEA inflammatory response
GO:0008191 IEA metalloendopeptidase inhibitor activity
GO:0008201 IEA heparin binding
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0050965 IEA detection of temperature stimulus involved in sensory perception of pain
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058981 Lxn-001 protein_coding Mus_musculus 0 704
ENSMUST00000160827 Lxn-003 retained_intron Mus_musculus 0 532

Loading