C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004JU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063624-ENSDARG00000043102 CGP 7955 15:1163682-1195587
GeneTranscriptPositionBiotype
ENSDARG00000063624 (gfm1)
G elongation factor, mitochondrial 1
ENSDART00000093152 (gfm1-001) 1163682-1191575 protein_coding
CIL_0004JU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168827-ENSG00000168827 CGP 9606 3:158644278-158692575
GeneTranscriptPositionBiotype
ENSG00000079257 (LXN)
latexin
ENST00000264265 (LXN-001) 158666414-158672693 protein_coding
ENST00000482640 (LXN-002) 158645822-158669593 protein_coding
ENSG00000168827 (GFM1)
G elongation factor, mitochondrial 1
ENST00000264263 (GFM1-004) 158644597-158692569 protein_coding
ENST00000312756 (GFM1-006) 158652198-158657518 retained_intron
ENST00000464732 (GFM1-007) 158644705-158646781 protein_coding
ENST00000472383 (GFM1-010) 158684631-158691899 protein_coding
ENST00000477721 (GFM1-011) 158681988-158690586 retained_intron
ENST00000478251 (GFM1-005) 158646888-158651020 retained_intron
ENST00000478254 (GFM1-003) 158644528-158692572 nonsense_mediated_decay
ENST00000478576 (GFM1-002) 158644528-158682433 protein_coding
ENST00000481468 (GFM1-009) 158682107-158685314 retained_intron
ENST00000486715 (GFM1-001) 158644278-158692575 protein_coding
ENST00000490261 (GFM1-008) 158660264-158665407 processed_transcript
CIL_0004JU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027774-ENSMUSG00000027774 CGP 10090 3:67430096-67476529
GeneTranscriptPositionBiotype
ENSMUSG00000027774 (Gfm1)
G elongation factor, mitochondrial 1
ENSMUST00000077271 (Gfm1-001) 67430096-67476529 protein_coding
ENSMUST00000160529 (Gfm1-003) 67456479-67474804 retained_intron
ENSMUST00000161009 (Gfm1-002) 67430116-67458805 protein_coding
ENSMUSG00000047557 (Lxn)
latexin
ENSMUST00000058981 (Lxn-001) 67457998-67463926 protein_coding
ENSMUST00000160202 (Lxn-002) 67461061-67463782 retained_intron
ENSMUST00000160827 (Lxn-003) 67458001-67461634 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JU_0001ENSDARG00000063624ENSDART00000093152CIL_0004JU_0002ENSG00000079257ENST00000264265ENST00000482640ENSG00000168827ENST00000264263ENST00000312756ENST00000464732ENST00000472383ENST00000477721ENST00000478251ENST00000478254ENST00000478576ENST00000481468ENST00000486715ENST00000490261CIL_0004JU_0003ENSMUSG00000027774ENSMUST00000077271ENSMUST00000160529ENSMUST00000161009ENSMUSG00000047557ENSMUST00000058981ENSMUST00000160202ENSMUST00000160827
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JU_0001ENSDARG00000063624ENSDART00000093152CIL_0004JU_0002ENSG00000079257ENST00000264265ENSG00000168827ENST00000264263ENST00000478254ENST00000486715CIL_0004JU_0003ENSMUSG00000027774ENSMUST00000077271ENSMUST00000160529ENSMUST00000161009ENSMUSG00000047557ENSMUST00000058981ENSMUST00000160827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063624 ENSDART00000093152 N/A N/A N/A 5.927±3.72 N/A N/A 9.383±0.51 2.469±0.57 6.141±0.00 N/A 7.933±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079257 ENST00000264265 9.638±0.00 11.430±0.00 N/A N/A 6.917±1.22 7.713±2.07 N/A 10.047±0.00 2.847±0.00 15.620±0.00 N/A 12.628±6.62 7.516±3.01 N/A
ENST00000482640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168827 ENST00000264263 3.979±0.00 6.637±0.00 3.671±0.00 3.588±2.21 6.559±0.00 4.607±0.00 7.766±0.00 9.053±0.00 4.330±1.48 5.818±0.00 6.323±0.00 2.385±1.10 4.113±1.86 5.290±3.03
ENST00000312756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478254 3.673±0.00 3.634±0.00 N/A 5.104±0.00 2.589±0.00 N/A 5.051±0.00 1.832±0.00 5.718±0.00 2.096±0.00 2.970±1.78 3.197±0.00 2.783±1.32 6.793±0.00
ENST00000478576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486715 2.631±0.00 N/A N/A 6.408±0.00 9.373±0.00 3.259±1.52 4.607±0.00 3.897±0.04 1.622±0.00 2.583±0.00 3.643±0.00 6.168±0.39 5.325±3.27 10.384±0.00
ENST00000490261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027774 ENSMUST00000077271 3.492±0.31 N/A 3.149±0.41 4.807±1.32 3.258±0.94 N/A 11.995±0.46 6.120±0.78 4.201±1.03 3.183±0.22 14.582±1.16 3.549±1.42 5.220±1.81 1.373±0.23
ENSMUST00000160529 N/A N/A N/A N/A 11.557±2.73 N/A 22.214±1.38 11.942±0.66 13.103±2.61 N/A 14.234±0.80 9.925±0.60 9.656±4.75 N/A
ENSMUST00000161009 8.703±0.41 29.806±8.80 N/A 4.502±0.57 9.551±2.58 11.461±1.46 20.791±1.77 15.675±1.48 14.463±3.49 7.884±1.40 13.519±1.07 11.244±1.56 9.888±6.92 4.416±0.28
ENSMUSG00000047557 ENSMUST00000058981 16.453±2.89 44.429±3.54 14.121±1.48 24.476±7.17 22.806±10.07 35.505±9.87 N/A 15.455±1.97 3.971±0.00 55.825±10.88 N/A 25.924±9.78 19.688±9.36 9.940±4.20
ENSMUST00000160202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.262±0.00 5.911±0.00 N/A

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