C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264346 HERC6-001 ENSG00000138642 9606 + 4:88378863-88443111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000264346
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000264346 0.566±0.00 0.652±0.00 2.725±0.04 0.686±0.00 0.193±0.06 1.846±0.84 1.849±0.00 0.932±0.00 1.182±0.67 3.044±1.48 2.888±0.91 1.256±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KK CIL_0000KK_0001 CGP 4:88257620-88443111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0004842 IBA:IEA ubiquitin-protein transferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031817 Herc6-201 protein_coding Mus_musculus 0 1123

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