C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adducin 2 (beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264436 ADD2-001 ENSG00000075340 9606 - 2:70656784-70768177 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverMuscleOvaryTestisENST00000264436
Transcript ID Adipose Adrenal Brain Breast Colon Liver Muscle Ovary Testis
ENST00000264436 0.091±0.00 0.510±0.00 15.260±5.71 0.483±0.00 0.916±0.00 0.010±0.00 0.012±0.00 0.108±0.12 0.310±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DW CIL_0002DW_0002 CGP 2:70607618-70790643

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 TAS actin binding
GO:0005198 IEA structural molecule activity
GO:0005516 IEA calmodulin binding
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006461 IDA protein complex assembly
GO:0008290 IDA F-actin capping protein complex
GO:0016020 IEA membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0030036 IC actin cytoskeleton organization
GO:0030097 IEA hemopoiesis
GO:0030507 IDA spectrin binding
GO:0032092 IDA positive regulation of protein binding
GO:0042803 IPI protein homodimerization activity
GO:0046982 IPI protein heterodimerization activity
GO:0051015 IDA actin filament binding
GO:0051016 IDA barbed-end actin filament capping
GO:0051017 IDA actin filament bundle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032069 Add2-201 protein_coding Mus_musculus 0 2562
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.00005 57
ENSMUST00000111336 Sdhc-001 protein_coding Mus_musculus 0.00005 57
ENSMUST00000138202 Usp12-002 processed_transcript Mus_musculus 0.0006 53
ENSMUST00000085614 Usp12-001 protein_coding Mus_musculus 0.0006 53

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