C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138202 Usp12-002 ENSMUSG00000029640 10090 - 5:146734839-146758448 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000138202
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000138202 1.603±0.11 2.372±0.33 1.744±0.00 5.104±0.00 0.826±0.00 3.544±0.00 1.424±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G9 CIL_0000G9_0003 CGP 5:146582151-146795006
CIL_0000GA CIL_0000GA_0003 CGP 5:146734809-146837032

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264436 ADD2-001 protein_coding Homo_sapiens 0.0006 53
ENST00000282344 USP12-001 protein_coding Homo_sapiens 0 1297
ENST00000334256 KPNA4-001 protein_coding Homo_sapiens 0.0006 53
ENST00000360639 C15orf39-001 protein_coding Homo_sapiens 0.0003 53
ENST00000394987 C15orf39-002 protein_coding Homo_sapiens 0.0003 53
ENST00000407644 ADD2-008 protein_coding Homo_sapiens 0.0002 53
ENST00000427677 USP12PY-001 processed_pseudogene Homo_sapiens 0 861
ENST00000432383 USP12PX-001 processed_pseudogene Homo_sapiens 0 808
ENST00000523223 RP11-546B8.3-001 processed_pseudogene Homo_sapiens 0 580
ENST00000567617 C15orf39-004 protein_coding Homo_sapiens 0.0003 53
ENST00000612674 USP12-002 protein_coding Homo_sapiens 0 375

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