C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHC (Src homology 2 domain containing) transforming protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264554 SHC2-001 ENSG00000129946 9606 - 19:416583-460996 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264554
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264554 8.087±0.00 7.354±0.00 6.660±5.50 4.674±4.03 11.314±0.00 4.123±3.78 3.347±2.19 11.212±10.46 1.385±1.25 0.356±0.00 11.853±13.13 13.433±7.31 6.617±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CP CIL_0005CP_0001 CGP 19:405438-460996
CIL_0007I4 CIL_0007I4_0001 CGP 19:416583-474983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000187 IEA activation of MAPK activity
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0007265 TAS Ras protein signal transduction
GO:0008286 TAS insulin receptor signaling pathway
GO:0030971 IEA receptor tyrosine kinase binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163867 Shc2-201 protein_coding Mus_musculus 0 867
ENSMUST00000020564 Shc2-001 protein_coding Mus_musculus 0 867

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