C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264658 FBXL20-001 ENSG00000108306 9606 - 17:39252644-39401663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264658 2.714±0.00 1.793±0.00 1.486±0.00 2.687±0.62 2.465±0.39 1.574±0.28 1.096±0.73 0.947±0.06 1.272±1.14 0.883±0.43 0.985±0.00 1.357±0.31 0.396±0.27 2.551±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_0007D5 CIL_0007D5_0001 CGP 17:39210536-39402523
CIL_0007D6 CIL_0007D6_0001 CGP 17:39252644-39451286

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103143 Fbxl20-001 protein_coding Mus_musculus 0 2499
ENSMUST00000135969 Fbxl20-002 retained_intron Mus_musculus 0 1415
ENSMUST00000149327 Fbxl20-005 protein_coding Mus_musculus 0 479
ENSMUST00000150378 Fbxl20-003 protein_coding Mus_musculus 0 470
ENSMUST00000147971 Fbxl20-007 protein_coding Mus_musculus 0 431
ENSMUST00000146399 Fbxl20-004 processed_transcript Mus_musculus 0 407
ENSMUST00000148473 Fbxl20-006 processed_transcript Mus_musculus 7e-19 102

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