C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103143 Fbxl20-001 ENSMUSG00000020883 10090 - 11:98082556-98149612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103143 10.996±2.48 18.750±6.22 5.655±3.45 8.615±3.28 10.934±4.92 7.369±2.97 2.700±0.55 6.473±1.26 2.397±1.11 10.985±1.82 2.306±0.43 9.741±6.81 2.102±1.15 1.826±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0007D5 CIL_0007D5_0002 CGP 11:98036623-98150403
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007D6 CIL_0007D6_0002 CGP 11:98082556-98193293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001662 IMP behavioral fear response
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264658 FBXL20-001 protein_coding Homo_sapiens 0 2499
ENST00000394294 FBXL20-002 protein_coding Homo_sapiens 0 1583
ENST00000577399 FBXL20-004 protein_coding Homo_sapiens 0 1845
ENST00000581781 FBXL20-005 protein_coding Homo_sapiens 0 460
ENST00000583610 FBXL20-003 protein_coding Homo_sapiens 0 2119

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