C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108306-ENSG00000125686 CGP 9606 17:39252644-39451286
GeneTranscriptPositionBiotype
ENSG00000108306 (FBXL20)
F-box and leucine-rich repeat protein 20 		ENST00000264658 (FBXL20-001) 39252644-39401663 protein_coding
ENST00000394294 (FBXL20-002) 39260587-39401623 protein_coding
ENST00000577399 (FBXL20-004) 39261460-39402523 protein_coding
ENST00000581781 (FBXL20-005) 39263876-39270810 protein_coding
ENST00000583610 (FBXL20-003) 39259131-39401656 protein_coding
ENSG00000125686 (MED1)
mediator complex subunit 1 		ENST00000300651 (MED1-001) 39406601-39451286 protein_coding
ENST00000394287 (MED1-002) 39404285-39451268 protein_coding
ENST00000577831 (MED1-003) 39407714-39451272 nonsense_mediated_decay
ENST00000581334 (MED1-005) 39443550-39451272 nonsense_mediated_decay
ENST00000584308 (MED1-004) 39427446-39431236 retained_intron
ENSG00000266469 (CTB-131K11.1)
 ENST00000582842 (CTB-131K11.1-001) 39401793-39406233 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020883-ENSMUSG00000018160 CGP 10090 11:98082556-98193293
GeneTranscriptPositionBiotype
ENSMUSG00000018160 (Med1)
mediator complex subunit 1 		ENSMUST00000018304 (Med1-002) 98154248-98192955 protein_coding
ENSMUST00000092735 (Med1-004) 98152154-98193260 protein_coding
ENSMUST00000107545 (Med1-001) 98152155-98193293 protein_coding
ENSMUST00000126483 (Med1-006) 98153011-98163957 processed_transcript
ENSMUST00000129557 (Med1-003) 98169911-98193276 processed_transcript
ENSMUST00000135479 (Med1-005) 98169363-98179996 processed_transcript
ENSMUST00000147933 (Med1-007) 98157753-98161022 processed_transcript
ENSMUSG00000020883 (Fbxl20)
F-box and leucine-rich repeat protein 20 		ENSMUST00000103143 (Fbxl20-001) 98082556-98149612 protein_coding
ENSMUST00000135969 (Fbxl20-002) 98091091-98149606 retained_intron
ENSMUST00000146399 (Fbxl20-004) 98101739-98128963 processed_transcript
ENSMUST00000147971 (Fbxl20-007) 98095269-98100063 protein_coding
ENSMUST00000148473 (Fbxl20-006) 98127983-98128947 processed_transcript
ENSMUST00000149327 (Fbxl20-005) 98109518-98128963 protein_coding
ENSMUST00000150378 (Fbxl20-003) 98098422-98150403 protein_coding
ENSMUSG00000085897 (Gm11604)
predicted gene 11604 		ENSMUST00000121487 (Gm11604-001) 98185366-98186107 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D6_0001ENSG00000108306ENST00000264658ENST00000394294ENST00000577399ENST00000581781ENST00000583610ENSG00000125686ENST00000300651ENST00000394287ENST00000577831ENST00000581334ENST00000584308ENSG00000266469ENST00000582842CIL_0007D6_0002ENSMUSG00000018160ENSMUST00000018304ENSMUST00000092735ENSMUST00000107545ENSMUST00000126483ENSMUST00000129557ENSMUST00000135479ENSMUST00000147933ENSMUSG00000020883ENSMUST00000103143ENSMUST00000135969ENSMUST00000146399ENSMUST00000147971ENSMUST00000148473ENSMUST00000149327ENSMUST00000150378ENSMUSG00000085897ENSMUST00000121487
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D6_0001ENSG00000108306ENST00000264658ENST00000394294ENST00000583610ENSG00000125686ENST00000300651ENST00000394287ENST00000577831ENSG00000266469ENST00000582842CIL_0007D6_0002ENSMUSG00000018160ENSMUST00000018304ENSMUST00000092735ENSMUST00000107545ENSMUST00000129557ENSMUSG00000020883ENSMUST00000103143ENSMUST00000135969ENSMUSG00000085897ENSMUST00000121487
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108306 ENST00000264658 2.714±0.00 1.793±0.00 1.486±0.00 2.687±0.62 2.465±0.39 1.574±0.28 1.096±0.73 0.947±0.06 1.272±1.14 0.883±0.43 0.985±0.00 1.357±0.31 0.396±0.27 2.551±0.20
ENST00000394294 N/A N/A N/A N/A N/A 1.013±0.00 1.164±0.00 1.583±0.00 N/A N/A 1.253±0.00 2.081±0.00 1.646±0.01 4.377±0.00
ENST00000577399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583610 N/A N/A N/A 2.598±0.00 N/A N/A N/A N/A N/A 1.889±0.00 N/A N/A N/A N/A
ENSG00000125686 ENST00000300651 4.806±0.00 1.058±0.00 0.579±0.00 2.168±0.57 1.874±0.38 2.835±0.46 2.276±1.07 2.441±0.65 1.776±1.13 2.320±1.34 N/A 3.561±2.00 2.544±0.85 1.874±0.26
ENST00000394287 N/A N/A 1.156±0.00 1.145±0.00 2.248±0.00 N/A N/A N/A 2.529±0.00 1.355±0.00 N/A 3.238±0.00 N/A 1.450±0.00
ENST00000577831 N/A N/A N/A N/A 0.780±0.00 1.276±0.00 1.067±0.00 N/A N/A N/A 0.859±0.00 N/A N/A N/A
ENST00000581334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266469 ENST00000582842 N/A 6.439±0.00 1.362±0.00 0.978±0.00 N/A N/A 0.249±0.00 1.172±0.00 1.096±0.00 N/A 5.236±0.00 3.198±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018160 ENSMUST00000018304 1.426±0.00 N/A N/A N/A 2.336±1.22 1.075±0.20 1.705±0.34 N/A N/A N/A N/A 3.176±1.32 0.807±0.00 2.718±0.83
ENSMUST00000092735 N/A N/A N/A N/A N/A N/A N/A N/A 2.487±0.69 N/A N/A N/A 3.382±1.43 5.021±3.36
ENSMUST00000107545 6.700±1.57 8.792±1.60 6.168±0.12 5.392±3.13 4.345±1.76 5.269±0.61 4.242±0.64 5.173±0.29 3.612±0.81 6.893±0.12 3.070±0.35 6.097±1.38 2.762±1.51 6.369±3.05
ENSMUST00000126483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129557 N/A 15.405±3.63 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020883 ENSMUST00000103143 10.996±2.48 18.750±6.22 5.655±3.45 8.615±3.28 10.934±4.92 7.369±2.97 2.700±0.55 6.473±1.26 2.397±1.11 10.985±1.82 2.306±0.43 9.741±6.81 2.102±1.15 1.826±0.76
ENSMUST00000135969 N/A 33.404±3.62 N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A 1.153±0.00 2.121±0.00 N/A 0.242±0.00
ENSMUST00000146399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085897 ENSMUST00000121487 0.316±0.14 0.421±0.29 0.124±0.00 0.150±0.09 0.408±0.20 0.171±0.04 0.141±0.09 0.146±0.08 0.190±0.07 0.184±0.08 N/A 0.584±0.42 0.259±0.12 0.355±0.21

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