C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun RNA methyltransferase family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264670 NSUN2-001 ENSG00000037474 9606 - 5:6599239-6633291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264670 3.295±0.00 6.409±0.00 1.142±0.00 3.164±0.24 4.438±0.50 1.939±0.00 6.535±0.00 4.274±2.18 5.424±1.97 1.353±0.00 3.814±2.26 8.608±1.41 8.569±1.15 7.311±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048P CIL_00048P_0001 CGP 5:6599239-6669562

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007067 IEA mitotic nuclear division
GO:0008168 IEA methyltransferase activity
GO:0016428 IDA tRNA (cytosine-5-)-methyltransferase activity
GO:0030488 IDA tRNA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109699 Nsun2-001 protein_coding Mus_musculus 0 2211
ENSMUST00000022087 Nsun2-002 protein_coding Mus_musculus 0 2132
ENSMUST00000176485 Nsun2-008 protein_coding Mus_musculus 0 1849
ENSMUST00000136891 Nsun2-007 retained_intron Mus_musculus 0 263

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