C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Williams Beuren syndrome chromosome region 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265758 WBSCR22-001 ENSG00000071462 9606 + 7:73683568-73698212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265758 19.288±0.00 23.224±0.00 2.745±0.00 14.777±7.62 9.118±3.70 8.407±5.54 11.383±8.34 35.977±0.00 11.764±6.93 10.374±7.46 19.708±16.89 29.449±15.31 30.434±6.02 54.391±20.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008168 NAS:IEA methyltransferase activity
GO:0016568 IEA chromatin modification
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085984 Wbscr22-001 protein_coding Mus_musculus 0 758
ENSMUST00000071677 Wbscr22-002 protein_coding Mus_musculus 0 682
ENSMUST00000111205 Wbscr22-012 protein_coding Mus_musculus 0 564
ENSMUST00000144891 Wbscr22-008 retained_intron Mus_musculus 0 562
ENSMUST00000141765 Wbscr22-006 processed_transcript Mus_musculus 0 385
ENSMUST00000134180 Wbscr22-009 retained_intron Mus_musculus 0 309
ENSMUST00000149108 Wbscr22-007 retained_intron Mus_musculus 0 267
ENSMUST00000147756 Wbscr22-011 retained_intron Mus_musculus 4e-38 163
ENSMUST00000129691 Wbscr22-013 protein_coding Mus_musculus 2e-36 158

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