C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016897 Ttll1-001 ENSMUSG00000022442 10090 - 15:83483772-83510893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016897 5.534±0.43 2.529±0.50 5.170±2.34 17.762±3.23 3.562±0.57 2.875±0.68 15.345±2.30 4.032±0.58 2.116±1.17 5.392±0.21 1.154±0.21 5.393±1.84 2.954±1.39 10.824±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0002 VISTA 15:83223007-83824071
CIL_0008W4 CIL_0008W4_0002 VISTA 15:83338828-83940718
CIL_0004LJ CIL_0004LJ_0002 CGP 15:83375607-83510893
CIL_0004LI CIL_0004LI_0002 CGP 15:83483772-83544635

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003351 IMP epithelial cilium movement
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0016874 IEA ligase activity
GO:0018095 IMP protein polyglutamylation
GO:0035082 IMP axoneme assembly
GO:0044782 IMP cilium organization
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266254 TTLL1-001 protein_coding Homo_sapiens 0 1423
ENST00000331018 TTLL1-201 protein_coding Homo_sapiens 0 1003
ENST00000439248 TTLL1-003 nonsense_mediated_decay Homo_sapiens 0 1068
ENST00000440761 TTLL1-002 nonsense_mediated_decay Homo_sapiens 0 1306

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