C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GABA(A) receptor-associated protein like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266458 GABARAPL1-001 ENSG00000139112 9606 + 12:10212805-10223130 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266458 91.808±0.00 11.088±0.00 7.460±0.00 62.318±11.07 20.429±17.34 28.909±26.33 67.529±54.78 72.324±53.55 13.457±6.39 77.351±72.32 33.262±19.59 20.170±14.51 126.831±17.52 13.260±3.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T9 CIL_0000T9_0001 CGP 12:10170542-10223130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005874 IEA microtubule
GO:0006914 IEA autophagy
GO:0031410 IEA cytoplasmic vesicle
GO:0032590 IEA dendrite membrane
GO:0032839 IEA dendrite cytoplasm
GO:0044297 IEA cell body
GO:0048487 ISS beta-tubulin binding
GO:0050811 ISS GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032264 Gabarapl1-201 protein_coding Mus_musculus 0 695

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