C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 61
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267973 WDR61-001 ENSG00000140395 9606 - 15:78283235-78299794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000267973
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000267973 3.543±0.00 5.698±0.00 6.414±4.73 6.381±4.14 2.882±0.34 6.051±0.00 11.068±0.00 2.931±0.00 3.052±0.00 12.180±8.06 13.256±6.63 10.879±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TL CIL_0003TL_0001 CGP 15:78167468-78282196
CIL_0003TI CIL_0003TI_0001 CGP 15:78264086-78299794
CIL_00050O CIL_00050O_0002 CGP 15:78277835-78348230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0016055 IEA Wnt signaling pathway
GO:0016593 IDA Cdc73/Paf1 complex
GO:0032968 IDA positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 IDA transcriptionally active chromatin
GO:0045638 IDA negative regulation of myeloid cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051571 IMP positive regulation of histone H3-K4 methylation
GO:0055087 IDA Ski complex
GO:0080182 IMP histone H3-K4 trimethylation
GO:2001162 IMP positive regulation of histone H3-K79 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051822 Wdr61-001 protein_coding Mus_musculus 0 1435
ENSMUST00000121204 Wdr61-002 protein_coding Mus_musculus 0 1424
ENSMUST00000130368 Wdr61-003 protein_coding Mus_musculus 0 1410
ENSMUST00000118771 Wdr61-004 protein_coding Mus_musculus 0 1262
ENSMUST00000127451 Wdr61-005 protein_coding Mus_musculus 0 918
ENSMUST00000148494 Wdr61-006 retained_intron Mus_musculus 0 292
ENSMUST00000144365 Wdr61-007 retained_intron Mus_musculus 0 252

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