C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GDP dissociation inhibitor (GDI) alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269321 ARHGDIA-001 ENSG00000141522 9606 - 17:81867721-81871406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269321 169.923±0.00 171.536±0.00 1.608±0.00 51.659±44.60 55.392±50.30 53.492±45.63 20.096±18.68 58.564±51.36 26.273±22.29 111.175±107.49 29.634±26.35 103.915±87.73 198.690±93.42 63.158±36.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M1 CIL_0004M1_0001 CGP 17:81843159-81871406
CIL_0004M2 CIL_0004M2_0001 CGP 17:81867721-81891586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IEA immunological synapse
GO:0005094 IEA Rho GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0006928 TAS cellular component movement
GO:0007162 TAS negative regulation of cell adhesion
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007266 IEA Rho protein signal transduction
GO:0030336 IEA negative regulation of cell migration
GO:0032880 IEA regulation of protein localization
GO:0043066 TAS negative regulation of apoptotic process
GO:0043547 IEA positive regulation of GTPase activity
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050770 TAS regulation of axonogenesis
GO:0050771 TAS negative regulation of axonogenesis
GO:0050772 TAS positive regulation of axonogenesis
GO:0050790 IEA regulation of catalytic activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome
GO:0071526 ISS semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106197 Arhgdia-001 protein_coding Mus_musculus 0 869
ENSMUST00000067936 Arhgdia-002 protein_coding Mus_musculus 0 785

Loading