C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 157
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269391 RNF157-001 ENSG00000141576 9606 - 17:76142453-76240373 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000269391
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000269391 5.560±0.00 19.114±10.05 3.204±0.00 1.023±0.93 1.503±0.00 0.644±0.45 11.081±8.76 4.491±3.48 0.909±0.35 12.492±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_0007CH CIL_0007CH_0001 CGP 17:76136333-76240373
CIL_0007BT CIL_0007BT_0001 CGP 17:76142453-76271299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100202 Rnf157-001 protein_coding Mus_musculus 0 2447
ENSMUST00000106398 Rnf157-003 protein_coding Mus_musculus 0 2076
ENSMUST00000149147 Rnf157-002 protein_coding Mus_musculus 0 1554
ENSMUST00000141229 Rnf157-004 processed_transcript Mus_musculus 0 628
ENSDART00000080166 RNF157-201 protein_coding Danio_rerio 0 547
ENSDART00000152973 RNF157-001 protein_coding Danio_rerio 0 547
ENSMUST00000150775 Rnf157-010 protein_coding Mus_musculus 0 536
ENSMUST00000142758 Rnf157-007 processed_transcript Mus_musculus 0 366
ENSMUST00000070658 Mgrn1-202 protein_coding Mus_musculus 0 254
ENSMUST00000023159 Mgrn1-201 protein_coding Mus_musculus 0 239
ENSMUST00000129202 Rnf157-008 processed_transcript Mus_musculus 0 226
ENSMUST00000149682 Rnf157-006 processed_transcript Mus_musculus 0 219
ENSMUST00000137264 Rnf157-011 processed_transcript Mus_musculus 0 211
ENSMUST00000148763 Rnf157-009 processed_transcript Mus_musculus 2e-36 159

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