C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mahogunin, ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023159 Mgrn1-201 ENSMUSG00000022517 10090 + 16:4886100-4938296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023159 7.965±0.77 11.087±2.34 4.294±0.10 6.442±0.47 8.457±0.94 10.124±2.53 10.002±1.87 11.906±1.45 2.949±1.37 6.966±1.23 2.501±0.53 10.567±4.38 3.468±0.53 1.796±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IF CIL_0007IF_0003 CGP 16:4874778-4938296
CIL_00004Z CIL_00004Z_0002 CGP 16:4886100-4941020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005886 IEA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0043951 ISS negative regulation of cAMP-mediated signaling
GO:0045744 ISS negative regulation of G-protein coupled receptor protein signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262370 MGRN1-001 protein_coding Homo_sapiens 0 1336
ENST00000269391 RNF157-001 protein_coding Homo_sapiens 0 239
ENST00000319945 RNF157-010 protein_coding Homo_sapiens 0 239
ENST00000399577 MGRN1-004 protein_coding Homo_sapiens 0 1336
ENST00000415496 MGRN1-201 protein_coding Homo_sapiens 0 1722
ENST00000536343 MGRN1-002 nonsense_mediated_decay Homo_sapiens 0 1216
ENST00000586183 MGRN1-006 protein_coding Homo_sapiens 0 1823
ENST00000587145 MGRN1-008 processed_transcript Homo_sapiens 0 492
ENST00000587747 MGRN1-003 protein_coding Homo_sapiens 0 1009
ENST00000588015 MGRN1-014 processed_transcript Homo_sapiens 0 342
ENST00000588994 MGRN1-005 protein_coding Homo_sapiens 0 1655
ENST00000590457 MGRN1-009 retained_intron Homo_sapiens 0 366
ENST00000590790 MGRN1-017 protein_coding Homo_sapiens 0 1162
ENST00000591673 MGRN1-010 processed_transcript Homo_sapiens 0 433
ENST00000591895 MGRN1-007 protein_coding Homo_sapiens 0 544
ENST00000593155 RNF157-005 retained_intron Homo_sapiens 1e-32 143
ENST00000593224 MGRN1-019 protein_coding Homo_sapiens 0 414
ENST00000615397 MGRN1-020 retained_intron Homo_sapiens 2.00386e-43 182

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