C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000269740 SLC39A3-002 ENSG00000141873 9606 - 19:2732524-2740152 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269740
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269740 8.317±0.00 15.750±0.00 0.307±0.00 7.051±6.19 4.797±2.40 17.992±0.00 8.522±7.03 2.707±2.41 5.833±2.41 6.069±0.74 14.673±4.08 36.420±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0001 CGP 19:2732204-2783371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IEA zinc ion transmembrane transporter activity
GO:0005886 TAS plasma membrane
GO:0006829 IEA zinc ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport
GO:0071577 IEA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168076 Slc39a3-201 protein_coding Mus_musculus 0 787
ENSMUST00000059551 Slc39a3-002 protein_coding Mus_musculus 0 787
ENSMUST00000117276 Slc39a3-001 protein_coding Mus_musculus 0 787

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