C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 56
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000270115 LRRC56-001 ENSG00000161328 9606 + 11:537527-554916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270115 0.239±0.00 1.692±0.00 0.205±0.00 0.422±0.40 0.485±0.00 0.360±0.00 0.157±0.00 0.489±0.39 0.220±0.00 0.915±0.71 0.041±0.00 3.818±1.70 0.211±0.09 12.717±6.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040A CIL_00040A_0002 CGP 11:532242-554916
CIL_0003OU CIL_0003OU_0001 CGP 11:537527-560779

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047093 Lrrc56-001 protein_coding Mus_musculus 0 935
ENSMUST00000070458 Lrrc56-003 protein_coding Mus_musculus 0 935
ENSMUST00000084446 Lrrc56-002 protein_coding Mus_musculus 0 765

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