C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 56
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070458 Lrrc56-003 ENSMUSG00000038637 10090 + 7:141194176-141210049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070458
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070458 1.035±0.33 1.137±0.25 1.219±0.04 1.856±0.45 2.899±1.00 0.590±0.16 1.461±0.33 1.296±0.51 1.111±0.00 0.362±0.15 1.457±0.51 1.472±0.54 21.528±5.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040A CIL_00040A_0003 CGP 7:141189105-141210055
CIL_0003OU CIL_0003OU_0002 CGP 7:141194157-141214082

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270115 LRRC56-001 protein_coding Homo_sapiens 0 935
ENST00000611111 AC138374.1-201 protein_coding Homo_sapiens 0 935

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