C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium bicarbonate transporter, member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272716 SLC4A10-009 ENSG00000144290 9606 + 2:161624426-161983245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENST00000272716
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000272716 0.012±0.00 0.029±0.00 14.834±0.00 0.346±0.00 0.033±0.00 0.135±0.00 0.040±0.00 0.013±0.01 0.011±0.00 0.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JH CIL_0008JH_0001 VISTA 2:160938384-161538940
CIL_0005L1 CIL_0005L1_0001 CGP 2:161308038-161425870
CIL_0003AH CIL_0003AH_0001 CGP 2:161416094-161985282
CIL_0005KV CIL_0005KV_0001 CGP 2:161424332-162074542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0006810 IEA transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054484 Slc4a10-003 protein_coding Mus_musculus 0 4409
ENSMUST00000102735 Slc4a10-001 protein_coding Mus_musculus 0 4362
ENSMUST00000112480 Slc4a10-002 protein_coding Mus_musculus 0 3057
ENSMUST00000155219 Slc4a10-004 processed_transcript Mus_musculus 0 2368
ENSMUST00000147917 Slc4a10-006 processed_transcript Mus_musculus 0 538

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