C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm associated antigen 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272898 SPAG16-201 ENSG00000144451 9606 + 2:213284379-213375219 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungOvaryENST00000272898
Transcript ID Bladder Breast Colon Liver Lung Ovary
ENST00000272898 2.868±0.00 0.542±0.00 2.139±0.00 1.122±0.00 1.387±0.00 0.533±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PB CIL_0006PB_0001 CGP 2:212999691-214410501
CIL_0005MG CIL_0005MG_0001 CGP 2:213284379-214578959

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113940 Spag16-002 protein_coding Mus_musculus 0 575
ENSMUST00000065425 Spag16-001 protein_coding Mus_musculus 0 575
ENSMUST00000190833 Spag16-006 processed_transcript Mus_musculus 0 575
ENSMUST00000187159 Spag16-005 processed_transcript Mus_musculus 0 575

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