C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: copine family member IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273027 CPNE9-004 ENSG00000144550 9606 + 3:9715340-9726713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeOvaryPlacentaTestisENST00000273027
Transcript ID Adipose Ovary Placenta Testis
ENST00000273027 0.100±0.00 0.251±0.01 0.099±0.02 0.790±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WG CIL_0002WG_0001 CGP 3:9649433-9729908
CIL_00035Z CIL_00035Z_0001 CGP 3:9703807-9748018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134523 Cpne9-004 retained_intron Mus_musculus 0 725
ENSMUST00000130191 Cpne9-003 nonsense_mediated_decay Mus_musculus 0 725
ENSMUST00000132372 Cpne9-002 retained_intron Mus_musculus 0 725
ENSMUST00000041203 Cpne9-001 protein_coding Mus_musculus 0 725
ENSMUST00000136728 Cpne9-009 processed_transcript Mus_musculus 0 647

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