C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine family member IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130191 Cpne9-003 ENSMUSG00000030270 10090 + 6:113282310-113304824 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000130191
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000130191 0.020±0.00 0.666±0.24 0.010±0.00 6.093±7.86 0.090±0.00 0.011±0.00 0.077±0.03 0.018±0.01 0.190±0.13 0.062±0.06 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WG CIL_0002WG_0002 CGP 6:113237843-113305627
CIL_00035Z CIL_00035Z_0002 CGP 6:113282307-113324857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273027 CPNE9-004 protein_coding Homo_sapiens 0 725
ENST00000383831 CPNE9-002 protein_coding Homo_sapiens 0 1993
ENST00000383832 CPNE9-001 protein_coding Homo_sapiens 0 2300
ENST00000491802 CPNE9-003 retained_intron Homo_sapiens 0 244
ENST00000613455 CPNE9-201 protein_coding Homo_sapiens 0 1988

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