C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276573 TRIM55-004 ENSG00000147573 9606 + 8:66127043-66174592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000276573
Transcript ID Adrenal Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000276573 0.035±0.00 0.064±0.04 8.397±0.00 0.337±0.00 3.308±0.00 2.816±0.79 0.016±0.00 0.102±0.04 2.863±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DP CIL_0007DP_0002 CGP 8:66021560-66175487
CIL_0005BV CIL_0005BV_0002 CGP 8:66126896-66178725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 NAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 NAS microtubule
GO:0007165 NAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029139 Trim55-201 protein_coding Mus_musculus 0 1628

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