C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000280612 SLC7A11-001 ENSG00000151012 9606 - 4:138164097-138242349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000280612
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000280612 0.253±0.00 0.165±0.00 0.006±0.00 2.778±0.31 0.060±0.00 0.036±0.00 0.020±0.00 0.009±0.00 0.501±0.00 0.004±0.00 1.675±1.47 0.128±0.00 0.613±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001R CIL_00001R_0001 CGP 4:137518918-138242349
CIL_00001Q CIL_00001Q_0001 CGP 4:138164097-139045752

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005515 IPI protein binding
GO:0005791 IEA rough endoplasmic reticulum
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006865 TAS:IEA amino acid transport
GO:0006979 IEA response to oxidative stress
GO:0007420 IEA brain development
GO:0007596 TAS blood coagulation
GO:0009636 IDA response to toxic substance
GO:0009986 IDA cell surface
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015327 TAS cystine:glutamate antiporter activity
GO:0015813 TAS L-glutamate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035094 IEA response to nicotine
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0050900 TAS leukocyte migration
GO:0055085 TAS:IEA transmembrane transport
GO:0070306 IEA lens fiber cell differentiation
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029297 Slc7a11-001 protein_coding Mus_musculus 0 1770
ENSMUST00000142932 Slc7a11-002 retained_intron Mus_musculus 0 948

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