C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: upstream binding protein 1 (LBP-1a)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000283628 UBP1-003 ENSG00000153560 9606 - 3:33390134-33440510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000283628
Transcript ID Ovary
ENST00000283628 2.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TS CIL_0001TS_0002 CGP 3:33150042-33403662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005634 TAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0019079 TAS viral genome replication
GO:0045892 TAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084885 Ubp1-202 protein_coding Mus_musculus 0 2531
ENSMUST00000009885 Ubp1-201 protein_coding Mus_musculus 0 1179
ENSMUST00000116492 Ubp1-203 protein_coding Mus_musculus 0 1177

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